Genotyping of amino acid-producing Corynebacterium glutamicum strains based on multi-locus sequence typing (MLST) scheme

Bioresources and Bioprocessing

Table 1 Details and allelic profile of the strains used in this study

ST	Group	Strains	Synonym	Descriptions	Genome sequence ^a	Allelic profile
ST	Group	Strains	Synonym	Descriptions	Genome sequence ^a	*atpA*	*dnaE*	*dnaK*	*fusA*	*leuA*	*odhA*	*rpoB*
		ATCC13032		C. glutamicum type strain	NC_003450, NC_006958
1	1	MB001		Prophage-free variant of ATCC 13032 with a 6% reduced genome	NC_022040	1	1	1	1	1	1	1
		Crude sample		A crude lysine sample, commercially obtained
2	2	ATCC13869	B. lactofermentum	‘Wild-type B. lactofermentum’		1	2	2	4	2	4	4
3	3	ATCC13870	C. acetoacidophilum	‘Wild-type C. acetoacidophilum’		4	6	5	5	6	1	1
4	4	ATCC14067	B. flavum	J. Bacteriol. 194 (3), 742-743 (2012)	AGQQ01000000	3	2	4	6	2	2	2
5	4	ATCC21493	B. flavum	Producing arginine, derived from ATCC 14067 (SIIM B234)		3	2	4	6	2	5	2
6	5	R		C. glutamicum isolated in Japan from a meadow soil sample	NC_009342	5	3	7	3	3	2	1
7	6	AS1.299	C. pekinense	‘Wild-type C. pekinense,’ producing glutamate (=CICC 10119, SIIM B3)		2	5	3	5	4	3	3
		AS1.563	C. pekinense	(=CICC 10178, SIIM B165) producing lysine, derived from AS1.299
8	7	617		A glutamate-producing strain previously used in China (=CICC 10117, SIIM B1)		1	2	4	7	7	3	2
		T6-13	B. tianjinese	‘Wild-type B. tianjinese’ (=CICC 20182, SIIM B226)
		SCgG1		Hyper-producing glutamate	NC_021351
9	8	SCgG2		Hyper-producing glutamate	NC_021352	5	4	6	2	5	3	1
		S9114		A strain for industrial production of glutamate	AFYA01000000
		Z188		Hyper-producing glutamate	AKXP01000000
		AS1.542	C. crenatum	‘Wild-type C. crenatum’ (=CICC10124, SIIM B6)
10	8	MT	C. crenatum	A mutant of AS1.542	AQPS01000000	6	4	6	2	5	3	1