Table 4 Summary of important up-regulated transcription factors in the process of glucoamylase fermentation
From: Global transcriptional response of Aspergillus niger in the process of glucoamylase fermentation
Gene ID | Alter name | FPKM value of each gene in the four sampling time points in this study | Annotation in A. niger | References | |||
|---|---|---|---|---|---|---|---|
16Â h | 24Â h | 42Â h | 66Â h | ||||
An04g06940 | prtT | 267.5 | 105.1 | 335.1 | 362.5 | Member of the fungal-specific Zn2Cys6-binuclear cluster protein family; transcriptional activator of major secreted proteases and also enhances the expression of genes involved in iron uptake | Punt et al. (2008); Hagag et al. (2012); Sharon et al. (2009) |
An14g02540 | srbB | 382.6 | 292.3 | 792.7 | 1095.7 | HLH DNA-binding domain protein, sterol-regulatory element-binding protein response to hypoxia; SrbB co-regulates genes involved in heme biosynthesis and demethylation of C4-sterols with SrbA | Cerqueira et al. (2014); Park et al. (2008); Chung et al. (2014) |
An11g07350 | Â | 885.3 | 1635.8 | 407.6 | 267.4 | Ortholog(s) have role in positive regulation of secondary metabolite biosynthetic process; Function- GABA utilization is amdR-dependent in A. oryzae (777 aa) | |
An17g01370 | Ada | 26.3 | 95.8 | 326.9 | 306.6 | DNA repair and transcription factor Ada | Punt et al. (2008) |