Table 1 Comparison of the main characteristics of S. erythraea and other actinomyces
Characteristics | iZZ1342 this study | S. erythraea NRRL23338-GSMR (Licona-Cassani 2012) | S. coelicolor A3(2) (Borodina et al. 2005) | Corynebacterium glutamicum (Kjeldsen and Nielsen 2009) |
|---|---|---|---|---|
Genome size (Mb) | 8.2 | 8.2 | 8.7 | 3.3 |
Total genes | 7233 | 7233 | 7910 | 3002 |
Genes assigned | 1342 | 1272 | 711 | 448 |
Annotation coverage (%) | 18.6 | 17.5 | 13 | 14.9 |
Total reactions | 1684 | 3985 | 971 | 446 |
Unique reactions | 1684 | 1482 | 700 | 446 |
Metabolic reactions | 1551 | 3872 | 819 | 376 |
Transport and exchange reactions | 133 | 113 | 152 | 70 |
Metabolites | 1614 | 1646 | 500 | 411 |
GPRs associations | 1441 | – | 764 | 227 |
Reactions with genes assigned | 1441 | 1223 | 764 | 227 |
Reactions without genes assigned | 243 | 2762 | 207 | 219 |