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Table 2 Prediction of growth capability of iZZ1342 on different carbon sources (+ represents growth and − represents non-growth)

From: In silico reconstruction and experimental validation of Saccharopolyspora erythraea genome-scale metabolic model iZZ1342 that accounts for 1685 ORFs

Carbon source Observed in experiment Predicted in model References
alpha-d-Glucose + + El-Enshasy et al. (2008)
Sucrose + + El-Enshasy et al. (2008)
d-Xylose + El-Enshasy et al. (2008)
Mannose + + This study
Mannitol + + This study
l-Rhamnose + + This study
l-Arabinose + + El-Enshasy et al. (2008)
d-Mannose + + This study
d-Fructose + + El-Enshasy et al. (2008)
Raffinose + + This study
d-Galactose + + El-Enshasy et al. (2008)
Inost + + This study
Melibiose + + This study
d-Ribose + + El-Enshasy et al. (2008)
alpha, alpha-Trehalose + + El-Enshasy et al. (2008)
Maltose + + El-Enshasy et al. (2008)
β-Lactose + + El-Enshasy et al. (2008)
α-Lactose + El-Enshasy et al. (2008)
Pyruvate + This study
2-Oxoglutarate This study
Succinate This study
Fumarate This study
Acetate + This study
Propanoate + This study
Citrate + + This study
(S)-Malate + This study
(S)-Lactate This study