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Table 2 Prediction of growth capability of iZZ1342 on different carbon sources (+ represents growth and − represents non-growth)

From: In silico reconstruction and experimental validation of Saccharopolyspora erythraea genome-scale metabolic model iZZ1342 that accounts for 1685 ORFs

Carbon source

Observed in experiment

Predicted in model

References

alpha-d-Glucose

+

+

El-Enshasy et al. (2008)

Sucrose

+

+

El-Enshasy et al. (2008)

d-Xylose

+

−

El-Enshasy et al. (2008)

Mannose

+

+

This study

Mannitol

+

+

This study

l-Rhamnose

+

+

This study

l-Arabinose

+

+

El-Enshasy et al. (2008)

d-Mannose

+

+

This study

d-Fructose

+

+

El-Enshasy et al. (2008)

Raffinose

+

+

This study

d-Galactose

+

+

El-Enshasy et al. (2008)

Inost

+

+

This study

Melibiose

+

+

This study

d-Ribose

+

+

El-Enshasy et al. (2008)

alpha, alpha-Trehalose

+

+

El-Enshasy et al. (2008)

Maltose

+

+

El-Enshasy et al. (2008)

β-Lactose

+

+

El-Enshasy et al. (2008)

α-Lactose

+

−

El-Enshasy et al. (2008)

Pyruvate

+

−

This study

2-Oxoglutarate

−

−

This study

Succinate

−

−

This study

Fumarate

−

−

This study

Acetate

+

−

This study

Propanoate

+

−

This study

Citrate

+

+

This study

(S)-Malate

+

−

This study

(S)-Lactate

−

−

This study