Skip to main content

Table 3 Prediction of growth capability of iZZ1342 on different nitrogen sources (+ represents growth and − represents non-growth)

From: In silico reconstruction and experimental validation of Saccharopolyspora erythraea genome-scale metabolic model iZZ1342 that accounts for 1685 ORFs

Nitrogen source

Observed in experiment

Predicted in model

References

l-Valine

+

+

This study

l-Threonine

+

+

This study

l-Isoleucine

+

−

This study

l-Leucine

+

−

This study

l-Methionine

+

+

This study

L-Aspartate

+

+

This study

l-Glutamine

+

+

This study

l-Phenylalanine

+

+

This study

l-Glutamate

+

+

This study

l-Serine

+

+

This study

l-Proline

+

+

This study

Glycine

+

+

This study

l-Lysine

−

−

This study

l-Histidine

+

+

This study

l-Cysteine

+

+

This study

l-Asparagine

+

+

This study

l-Alanine

+

+

This study

l-Arginine

+

+

This study

l-Tyrosine

−

−

This study

l-Tryptophan

+

+

This study

Urea

+

+

This study

4-Aminobutanoate

+

+

This study

Xanthine

−

−

This study

Hypoxanthine

−

−

This study

Ammonium chloride

+

+

Zou et al. (2009)

Ammonium nitrate

+

+

El-Enshasy et al. (2008)

Ammonium acetate

+

+

El-Enshasy et al. (2008)

Ammonium oxalate

+

+

El-Enshasy et al. (2008)

Ammonium carbonate

+

+

El-Enshasy et al. (2008)

Ammonium sulfate

+

+

Zou et al. (2009)

Ammonium dihydrogen phosphate

+

+

El-Enshasy et al. (2008)