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Table 3 Prediction of growth capability of iZZ1342 on different nitrogen sources (+ represents growth and − represents non-growth)

From: In silico reconstruction and experimental validation of Saccharopolyspora erythraea genome-scale metabolic model iZZ1342 that accounts for 1685 ORFs

Nitrogen source Observed in experiment Predicted in model References
l-Valine + + This study
l-Threonine + + This study
l-Isoleucine + This study
l-Leucine + This study
l-Methionine + + This study
L-Aspartate + + This study
l-Glutamine + + This study
l-Phenylalanine + + This study
l-Glutamate + + This study
l-Serine + + This study
l-Proline + + This study
Glycine + + This study
l-Lysine This study
l-Histidine + + This study
l-Cysteine + + This study
l-Asparagine + + This study
l-Alanine + + This study
l-Arginine + + This study
l-Tyrosine This study
l-Tryptophan + + This study
Urea + + This study
4-Aminobutanoate + + This study
Xanthine This study
Hypoxanthine This study
Ammonium chloride + + Zou et al. (2009)
Ammonium nitrate + + El-Enshasy et al. (2008)
Ammonium acetate + + El-Enshasy et al. (2008)
Ammonium oxalate + + El-Enshasy et al. (2008)
Ammonium carbonate + + El-Enshasy et al. (2008)
Ammonium sulfate + + Zou et al. (2009)
Ammonium dihydrogen phosphate + + El-Enshasy et al. (2008)