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Table 2 Dark fermentative biohydrogen production from industrial wastes using mixed culture

From: Microbiomes of biohydrogen production from dark fermentation of industrial wastes: current trends, advanced tools and future outlook

Inoculum source

Substrate

Inoculum pre-treatment

Reactor type

Operating Conditions

% H2

H2 yield

H2 production rate

Dominant members

Technique for microbial community analysis

References

Temperature, T

pH

Wastewater treatment plant

Glycerol

IR

Batch

36 °C

Initial = 7.0,

Operation = uncontrolled

ND

0.52 mol H2/mol glycerol

ND

ND

ND

Chen et al. (2021)

Sewage treatment plant

Glucose

IR

Batch

36 °C

Initial = 7.0,

Operation = uncontrolled

ND

ND

ND

Clostridium sensu stricto 1 and Clostridium butyricum

Amplicon sequencing—Illumina MiSeq-PICRUSt

Yin and Wang (2021)

Biogas slurry

Sake lees

HT, 150 °C, 40 min

Batch

37 °C

Initial = 6.0,

Operation = uncontrolled

ND

112.07 mL H2/g COD

ND

Pantosa agglomerans,

Clostridium acetobutylicum, Clostridium butyricum

Amplicon sequencing—Illumina MiSeq

Choiron et al. (2020)

Biogas digester of pig farm

Alligator weed

HT, 100 °C, 30 min

Batch

37 °C

Initial = 7.0,

Operation = uncontrolled

ND

48.4 mL H2/g VS

5.63 mL H2/g VS h

Clostridium sensu stricto 1, Anaerobacterium, Clostridium IV

Amplicon sequencing—Illumina MiSeq-gene function prediction

Li et al. (2020)

Chicken manure

Cassava

HT, 95 °C, 15 min

Hungate tube

36 °C

Initial = 6.0,

Operation = uncontrolled

ND

ND

16.62 mL H2/L h

Clostridiaceae, Porphyromonadaceae and Rimonococcaceae

Amplicon sequencing—Illumina MiSeq

Martinez-Burgos et al. (2020)

Vinasse effluent

Cassava

HT, 95 °C, 15 min

Hungate tube

37 °C

Initial = 6.0,

Operation = uncontrolled

ND

ND

21.82 mL H2/L h

Clostridiaceae, Porphyromonadaceae and Rimonococcaceae

Amplicon sequencing—Illumina MiSeq

Martinez-Burgos et al. (2020)

Indigenous microbes

Banana wastes

ND

Batch

37 °C

Initial = 7.5,

Operation = uncontrolled

ND

38.08 mL H2

ND

Lactobacillus and Clostridium

Metagenomic—Illumina HiSeq

Mazareli et al. (2020)

Indigenous microbes

Coffee wastes

ND

Batch

30 °C

Initial = 7.0,

Operation = uncontrolled

ND

240 mL H2

3040 mL H2/L day

Clostridium sp., Lactobacillus sp., Kazachstania sp. and Saccharomyces sp.

Metagenomic—Illumina NovaSeq

Villa Montoya et al. (2020)

Indigenous microbes

Sugarcane molasses

ND

AnSTBR-A

55 °C

Initial = 3.8,

Operation = uncontrolled

51

1.18 mol H2/mol total carbohydrates

88 mL H2/L h

Thermoanaerobacterium

Amplicon sequencing—Ion Torrent

Oliveira et al. (2020)

Effluent of hydrogen fermenter

Vegetable waste

ND

Batch

35 °C

Initial = 7.0,

Operation = uncontrolled

43.54

151.67 mL H2/g VSadded

ND

ND

ND

Panin et al. (2020)

Soil sediment of mangroves

Cassava pulp

ND

Serum bottle

60 °C

Initial = 7.0,

Operation = uncontrolled

ND

23 mL H2/g substrate

ND

Clostridium thermopalmarium, Clostridium isatidis, Thermoanaerobacterium, Fonticella tunisiensis

Amplicon sequencing—Illumina

Pason et al. (2020)

Municipal wastewater treatment plant

Glycerol

ND

CSTR

37 °C

Initial = 6.0,

Operation = 6.5

49

403.6 mmol H2/mol Glyconsumed

49.4 mL H2/L h

Clostridium intestinale

Amplicon sequencing—Illumina MiSeq

Paillet et al. (2019)

Sewage treatment plant

Glucose

HT, 100 °C, 15 min

Batch

37 °C

Initial = 7.0,

Operation = uncontrolled

ND

1.4 mol H2/mol glucose

ND

Clostridium sensu stricto 1 (C. butyricum and C. paraputrificum), Paraclostridium, Paeniclostridium and Romboutsia

Amplicon sequencing—Illumina MiSeq

Yang and Wang (2019)

Buffalo sludge and rumen

Buffalo waste

ND

Batch

39 °C

Initial = 7.0,

Operation = uncontrolled

48.1

120.8 mL H2/g VS

ND

Clostridia Incertae Sedis, Clostridium sensu stricto 1, Prevotella

Amplicon sequencing—Illumina MiSeq

Chiariotti and Crisà (2018)

Food waste treatment plant

Glucose

No pre-treatment

UASB

38 °C

Initial = 4.9,

Operation = uncontrolled

43.49

0.89 mol H2/mol hexose

4.68 L H2/L day

Enterobacter cloacae, Aeromonas hydrophila, Clostridium pasteurianum

Amplicon sequencing—Ion Torrent

Cho et al. (2018)

Mixed culture

Tequila vinasse

ND

CSTR

35 °C

Initial = 6.5,

Operation = 5.8

70

124 NmL H2/g VSadded

159 NmL H2/L h

Clostridium beijerinckii, Streptococcus sp. and Acetobacter lovaniensis

Amplicon sequencing—Illumina MiSeq

García-Depraect and León-Becerril (2018)

Soil and composting residue

Sugarcane bargasse

ND

Batch

37 °C

Initial = 6.0,

Operation = uncontrolled

ND

1.53 mmol H2/L

ND

Clostridium, Bacteroides, Parabacteroides, Porphyromonas, Desulfitobacterium, Bacillus and Methanothermobacter

Metagenomic—Illumina HiSeq

Soares et al. (2018)

Anaerobic sludge

Food waste

ND

Batch

35 °C

Initial = 6.3,

Operation = 7.0

    

Metaproteomic

Jia et al. (2017)

Brewery wastewater treatment plant

Glucose

HT, 90 °C, 30 min

FBR

37 °C

Initial = 5.5,

Operation = 5.5

ND

2.3 mol H2/mol glucoseadded

78 L H2/L day

Clostridium butyricum, Enterococcus sp. and Enterobacter sp.

qPCR

Pugazhendhi et al. (2017)

Domestic wastewater treatment plant

Glycerol

Ae, 24 h

CSTR

37 °C

Initial = 5.5,

Operation = 5.5

61

0.58 mol H2/mol glycerol

88.0 mmol H2/L day

Clostridium sp., Prevotella sp. and Klebsiella sp.

CE-SSCP—Illumina MiSeq

Silva-Illanes et al. (2017)

Domestic wastewater treatment plant

Glycerol

Ae, 24 h

CSTR

37 °C

Initial = 6.0,

Operation = 6.0

57

0.26 mol H2/mol glycerol

51.0 mmol H2/L day

Clostridium sp., Enterococcus sp., Prevotella sp. and Snodgrassella sp.

CE-SSCP—Illumina MiSeq

Silva-Illanes et al. (2017)

Brewery industry

Food waste

HT, 103–105 °C, 60 min

ASBR

35 °C

Initial = 5.5,

Operation = 5.5

37.9

103.6 mL H2/g CODremoved

226.4 mL H2/L h

Megasphera, Veillonella

Pyrosequencing—Roche

Moreno-Andrade et al. (2015)

Fruit juice wastewater treatment plant

Food waste

HT, 100 °C, 60 min

Batch

37 °C

Initial = 6.0,

Operation = uncontrolled

ND

2.68 mol H2/mol hexose

ND

Clostridium frigidicarnis

Pyrosequencing—Roche

Laothanachareon et al. (2014)

Sugarcane stillage treatment plant

Sugarcane stillage

HT, 90 °C, 10 min

AFBR

55 °C

ND

43.3–48.9

2.23 mmol H2/g CODadded

1.49 L H2/L h

Megasphera sp., Lactobacillus

PCR-DGGE—Cloning

Santos et al. (2014)

Garbage compost

Beer lees

No pre-treatment

Batch

37 °C

Initial = 4.1–7.0,

Operation = uncontrolled

ND

29.3 mL H2/g TS

ND

Clostridium roseum

PCR-DGGE

Bando et al. (2013)

Municipal wastewater treatment plant

Rice straw hydrolysate

HT, 95–100 °C, 60 min

CSABR

37 °C

Initial = 5.5,

Operation = 5.5

ND

0.69 mol H2/mol T-sugar

10 L H2/L day

Clostridium pasteurianum

PCR-DGGE

Liu et al. (2013)

Beach

Sucrose

HT, 100 °C, 45 min

AGSBR

35 °C

Initial = 6.0,

Operation = 6.0

37

1.04 mol H2/mol sucrose

15.59 m3 H2/ m3 day

Clostridium pasteurianum and Bifidobacteria sp.

PCR-DGGE

Lin et al. (2011)

Wastewater treatment plant

Corn stover hydrolysate

HT, 100 °C, 60 min

Serum bottle

37 °C

Initial = 7.0,

Operation = uncontrolled

ND

502 mL H2/L

37.3 mL H2/h

Clostridium bifermentans, Escherichia coli, Escherichia vulneris, Uncultured Escherichia sp.

PCR-DGGE—Cloning

Zhang et al. (2011)

Wastewater treatment plant

Corn stover hydrolysate

Ac, pH 3, 60 min

Serum bottle

37 °C

Initial = 7.0,

Operation = uncontrolled

ND

352.1 mL H2/L

13.7 mL H2/h

Enterobacter aerogenes, Escherichia coli, Escherichia vulneris, Uncultured Escherichia sp.

PCR-DGGE—Cloning

Zhang et al. (2011)

Wastewater treatment plant

Corn stover hydrolysate

Ba, pH 12, 60 min

Serum bottle

37 °C

Initial = 7.0,

Operation = uncontrolled

ND

458.4 mL H2/L

12.3 mL H2/h

Enterobacter aerogenes, Klebsiella, Pectobacterium sp.

PCR-DGGE—Cloning

Zhang et al. (2011)

Wastewater treatment plant

Corn stover hydrolysate

Us, 15 min

Serum bottle

37 °C

Initial = 7.0,

Operation = uncontrolled

ND

295.9 mL H2/L

18.7 mL H2/h

Enterobacter aerogenes, Pectobacterium sp.

PCR-DGGE—Cloning

Zhang et al. (2011)

Wastewater treatment plant

Corn stover hydrolysate

Uv, 15 min

Serum bottle

37 °C

Initial = 7.0,

Operation = uncontrolled

ND

290.9 mL H2/L

58.9 mL H2/h

Pectobacterium sp.

PCR-DGGE—Cloning

Zhang et al. (2011)

Sewage treatment plant

Molasses

HT, 100 °C, 45 min

CSTR

35 °C

Initial = 5.5,

Operation = 5.5

47

2.1 mol H2/mol hexose

153 mmol H2/L day

Clostridium acetobutylicum and Clostridium pasteurianum

qPCR

Lay et al. (2010)

  1. HT: heat treatment; IR: ionising radiation; Ac: acid; Ae: aeration; Ba: base; ND: no data; Us: ultrasonication; Uv: ultraviolet; AFBR: anaerobic thermophilic fluidised bed reactor; AGSBR: agitated granular sludge bed reactor; AnSTBR-A: anaerobic structured-bed reactor; ASBR: anaerobic sequencing batch reactor; CSABR: continuously stirred anaerobic bioreactor; CSTR: continuous stirred tank reactor; FBR: fixed-bed reactor; UASB: up-flow anaerobic sludge blanket reactor; COD: chemical oxygen demand; Gly: glycerol; VS: volatile solid; CE-SSP: capillary electrophoresis single-stranded conformation; PCR-DGGE: polymerase chain reaction-denaturing gradient gel electrophoresis; qPCR: quantitative polymerase chain reaction