Table 3 Identification of sequences retrieved from fragments of PCR-DGGE analysis
DGGE fragment | Identity (%) | Organism | Genebank accession number |
|---|---|---|---|
C6 | 96.60 | Chryseolinea soli strain KIS68-18 | NR_165708 |
C7 | 99.29 | Uncultured Acidobacteria clone TGRWLFZ-16Â s-SSe277 | KT122188.1 |
WW8 | 97.16 | Blastocatella fastidiosa strain A2-16 | NR_118350 |
WW9 | 96.00 | Uncultured Acidobacteria | HM062184.1 |
WW18 | 98.96 | Uncultured Ohtaekwangia sp. clone CS11 | JQ771967 |
WW19 | 98.72 | Massilia buxea strain WS8 | MN733092.1 |
WW20 | 97.20 | Uncultured Beta proteobacterium clone 4y-82 | FJ444753.1 |
WW21 | 97.96 | Uncultured Acidobacteriaceae | AM935718.1 |
WW25 | 95.21 | Uncultured Acidobacteriaceae | HE860923.1 |
WW26 | 98.74 | Uncultured Ohtaekwangia sp. clone CS15 | JQ771971.1 |
WW27 | 94.22 | Uncultured Acidobacteria bacterium clone KF4-062 | JF521709.1 |
BW1 | 98.80 | Uncultured Saprospiraceae clone A9-33 | AM940634 |
BW3 | 97.78 | Algoriphagus terrigena strain DS-44 | NR_043616 |
BW4 | 97.60 | Uncultured Ohtaekwangia sp. clone CS12 | JQ771968.1 |
BW5 | 96.18 | Dongia sp. clone SBROB5_53 | LN555051 |
BW7 | 98.29 | Massilia aerilata strain A3-3 | JF496341 |
BW8 | 98.53 | Uncultured Blastocatella sp. clone SBK39 | KM108665.1 |
BW10 | 93.97 | Beta proteobacterium Schreyahn AOB SSU Aster 2 | AY795686.2 |
BW12 | 99.18 | Chryseolinea sp. strain A1X2S18 | MW546106 |
BW15 | 98.58 | Ramlibacter monticola strain G-3-2 | NR_159166 |
BW16 | 95.17 | Uncultured Chloroflexi | FM253679 |
BW21 | 94.00 | Uncultured Acidobacteria | JQ026742.1 |
BW23 | 97.98 | Uncultured Acidobacteria clone GASP-WB2S3_E12 | EF074059.1 |
BW25 | 96.60 | Massilia frigida strain CCM 8757/M. rubra strain P7271 | MN612048/MN612022 |