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Bioresources and Bioprocessing
Fig. 3 | Bioresources and Bioprocessing

Fig. 3

From: Reconstruction of genome-scale metabolic model of Yarrowia lipolytica and its application in overproduction of triacylglycerol

Fig. 3

Overview of different pathways involved in TAG synthesis in model iYL_2.0. Metabolite abbreviations are shown in black and genes in red or green. The genes in red are knockout targets identified by OptGeneKnock and IdealKnock, the genes in green are overexpression targets identified by APGC. Metabolite abbreviations: Glc_D, d-glucose; G6P, d-glucose 6-phosphate; F6P, d-glucose 6-phosphate; FDP, d-fructose 1,6-bisphosphate; DHAP, Glycerone phosphate; GA3P, d-glyceraldehyde 3-phosphate; 3PG, d-glycerate 3-phosphate; PYR, pyruvate; Oaa, oxaloacetate; Cit, citrate; Icit, isocitrate; Akg, 2-oxoglutarate; Succoa, succinyl-CoA; Succ, succinate; Fum, fumarate; Mal-L, l-malate; AccoA, Acetyl-CoA; MalcoA, Malonyl-CoA; beta-Ala, beta-alanine; L-Glu, l-glutamate; Glyc, glycerol; G3P, sn-glycerol 3-phosphate; Acyl-GP, 1-acyl-sn-glycerol 3-phosphate; DAGP, 1,2-diacyl-sn-glycerol 3-phosphate; DAG, diacylglycerol; TAG, triacylglycerol; ACP, acyl-carrier protein

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